Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012848.1 Corchorus capsularis cultivar CVL-1 contig12869, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53735

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
231--263
3
11.3
3
93
6
59
30
0
0
69
0.88
5805--5832
1
28.0
1
100
0
56
0
0
0
100
0.00
15783--15869
26
3.3
26
96
0
156
14
31
12
41
1.84
27909--27936
5
5.6
5
100
0
56
0
17
0
82
0.68
33397--33429
16
2.1
16
100
0
66
30
0
6
63
1.18
45998--46197
75
2.7
75
90
5
323
40
27
19
13
1.88
46244--46282
8
4.3
10
78
21
50
61
0
0
38
0.96

Tables:   1

The End!