Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012849.1 Corchorus capsularis cultivar CVL-1 contig12870, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29903

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
78--106
5
5.8
5
100
0
58
0
20
0
79
0.74
1989--2038
15
3.3
15
88
5
82
48
12
4
36
1.59
1995--2042
16
3.1
16
87
6
80
47
12
2
37
1.53
2049--2079
2
15.5
2
93
0
53
54
0
0
45
0.99
2046--2082
10
3.5
10
86
13
56
56
0
0
43
0.99
3159--3196
11
3.5
11
85
10
51
57
2
0
39
1.12
7716--7740
2
12.5
2
100
0
50
48
0
0
52
1.00
10151--10190
21
1.9
21
100
0
80
40
15
25
20
1.90
25889--25928
21
1.9
21
89
0
62
45
7
30
17
1.76
28527--29475
318
3.0
315
82
7
1017
33
14
17
35
1.90
29245--29781
285
1.9
284
85
6
746
34
12
14
37
1.85

Tables:   1

The End!