Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012851.1 Corchorus capsularis cultivar CVL-1 contig12872, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19223

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5699--5724
11
2.4
11
100
0
52
73
0
0
26
0.84
15177--15218
21
1.9
22
85
9
59
16
16
23
42
1.88
15269--15311
21
2.0
22
86
9
61
23
16
20
39
1.92
15346--15389
21
2.0
21
82
4
52
25
11
27
36
1.90
15442--15485
21
2.0
22
86
8
63
20
15
25
38
1.92
15532--15573
21
1.9
22
85
9
59
19
19
21
40
1.92
15123--15639
87
5.8
86
86
6
660
25
17
18
38
1.92
15123--15639
175
2.9
174
86
5
700
25
17
18
38
1.92
15140--15630
262
1.9
263
88
6
749
25
16
18
39
1.91
15553--15693
66
2.2
63
85
3
183
24
12
19
42
1.87
15463--15751
150
1.9
154
87
4
426
24
15
19
40
1.90
16361--16405
6
7.5
6
79
0
54
28
0
17
53
1.44
17157--17214
24
2.4
24
77
5
64
32
1
13
51
1.51
17461--17517
26
2.2
25
87
9
80
43
15
5
35
1.70
18981--19040
30
2.0
30
90
0
93
41
18
3
36
1.67

Tables:   1

The End!