Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012859.1 Corchorus capsularis cultivar CVL-1 contig12880, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20817

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
635--2133
324
4.7
321
83
5
1783
33
15
17
33
1.91
4712--6645
658
2.9
642
78
9
1997
33
14
16
35
1.89
6384--6896
269
1.9
268
80
6
599
34
12
15
37
1.85
16473--16522
24
2.1
24
88
0
73
12
46
12
30
1.77
18431--18486
7
8.0
7
97
0
94
28
10
32
28
1.90

Tables:   1

The End!