Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012864.1 Corchorus capsularis cultivar CVL-1 contig12885, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30931

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4879--4912
15
2.3
15
90
5
52
61
0
14
23
1.33
10720--10744
2
12.5
2
100
0
50
52
0
0
48
1.00
13790--13831
14
2.8
15
82
13
59
38
9
11
40
1.75
14952--14994
11
3.9
11
84
0
59
30
30
25
13
1.94
18259--18287
14
2.1
14
100
0
58
41
13
20
24
1.89
19808--20161
174
2.0
176
90
2
550
52
8
22
17
1.71
20378--20421
5
8.8
5
92
0
61
79
15
4
0
0.89
22170--22246
38
2.0
39
82
7
95
42
14
12
29
1.83
23072--23212
52
2.7
52
91
0
219
39
10
15
34
1.82
25121--25155
15
2.3
15
90
0
52
54
5
40
0
1.24
30857--30891
2
18.0
2
94
5
63
51
0
0
48
1.00

Tables:   1

The End!