Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012867.1 Corchorus capsularis cultivar CVL-1 contig12888, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27543

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25--87
33
1.9
33
90
6
101
15
28
38
17
1.91
952--977
7
3.7
7
100
0
52
73
0
26
0
0.84
10852--10901
17
2.9
18
85
8
61
24
20
22
34
1.97
12901--12936
18
2.1
18
89
5
56
5
8
0
86
0.72
22072--22116
2
23.0
2
81
4
56
55
0
0
44
0.99
22263--22386
27
4.6
27
77
15
114
46
2
34
16
1.60
25697--25753
24
2.4
24
78
0
69
12
7
1
78
1.01
26097--26131
11
3.2
11
87
0
52
77
17
5
0
0.96
26102--26151
16
3.1
16
78
13
57
74
18
8
0
1.06
26173--26264
46
2.0
46
97
0
175
41
11
4
42
1.61
27381--27507
39
3.2
40
86
5
179
46
6
26
20
1.74

Tables:   1

The End!