Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012871.1 Corchorus capsularis cultivar CVL-1 contig12892, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24876

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
979--1013
17
2.1
17
100
0
70
28
17
8
45
1.77
1809--1860
27
1.9
27
81
14
63
36
9
23
30
1.87
2892--3011
59
2.0
59
96
0
222
45
16
10
26
1.80
3111--3183
28
2.6
28
86
0
92
45
28
9
16
1.79
6174--6207
15
2.2
16
89
5
52
52
14
26
5
1.64
8259--8285
11
2.5
11
100
0
54
7
0
0
92
0.38
13053--13101
2
24.5
2
100
0
98
51
48
0
0
1.00

Tables:   1

The End!