Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012874.1 Corchorus capsularis cultivar CVL-1 contig12895, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10556

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
487--534
13
3.5
13
72
10
51
33
2
4
60
1.27
487--545
28
2.0
30
93
6
104
33
5
3
57
1.37
1144--1180
2
18.5
2
100
0
74
48
0
0
51
1.00
1325--1366
18
2.3
18
88
8
59
40
4
28
26
1.76
1812--1840
2
14.5
2
100
0
58
48
0
0
51
1.00
2386--2410
2
12.5
2
100
0
50
52
0
0
48
1.00
2510--2535
3
8.7
3
100
0
52
65
0
0
34
0.93
4922--4979
15
4.1
15
69
13
50
37
6
0
55
1.27
5022--5117
38
2.6
37
80
6
122
14
17
10
57
1.65
5176--5280
22
4.7
22
73
2
75
33
12
16
38
1.86
9130--9182
27
2.0
27
85
7
74
39
9
1
49
1.46

Tables:   1

The End!