Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012895.1 Corchorus capsularis cultivar CVL-1 contig12916, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43780

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1317--1349
3
11.0
3
93
0
57
63
0
0
36
0.95
5693--5773
22
3.5
24
70
23
75
38
2
2
56
1.26
5723--5771
25
2.0
25
84
8
64
38
0
2
59
1.09
8293--8345
18
2.7
19
83
13
63
39
3
0
56
1.17
8283--8360
22
3.5
22
73
20
72
43
2
0
53
1.14
8281--8363
21
3.8
21
75
16
73
42
2
0
55
1.13
16025--16098
30
2.5
30
82
4
87
27
20
13
39
1.90
18422--18465
2
22.0
2
95
0
70
45
0
4
50
1.22
18689--18847
79
2.0
79
96
0
291
42
10
11
35
1.75
21980--22004
12
2.1
12
100
0
50
32
8
8
52
1.60
22531--22587
27
2.1
27
93
0
96
52
8
5
33
1.55
22923--23680
383
2.0
377
88
5
1147
39
9
10
39
1.73
30671--30778
38
2.9
38
92
1
173
21
21
35
22
1.96
42173--42206
16
2.1
16
94
0
59
14
23
14
47
1.82
42959--43167
65
3.2
65
92
0
337
13
19
14
52
1.75

Tables:   1

The End!