Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012897.1 Corchorus capsularis cultivar CVL-1 contig12918, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30143

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2347--2392
22
2.0
23
95
4
85
45
0
4
50
1.21
10728--10776
23
2.1
23
88
7
73
18
12
6
63
1.48
11270--11307
11
3.5
11
85
10
51
57
2
0
39
1.12
11501--11533
17
1.9
17
93
0
57
6
21
6
66
1.35
16286--16317
17
1.9
17
93
6
57
28
56
12
3
1.51
16400--16490
16
5.7
16
83
5
87
36
36
18
8
1.82
16403--16478
32
2.4
32
84
8
102
32
39
19
7
1.81
16633--16669
14
2.7
14
87
4
58
67
0
13
18
1.23
24694--24727
11
3.0
11
91
4
50
41
11
2
44
1.56
26368--26429
31
2.0
31
100
0
124
41
3
19
35
1.67

Tables:   1

The End!