Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012898.1 Corchorus capsularis cultivar CVL-1 contig12919, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17520

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
718--750
2
16.5
2
93
0
57
51
3
0
45
1.16
941--1031
45
2.0
46
97
2
175
35
23
17
24
1.95
1090--1415
166
2.0
167
88
0
483
29
14
16
39
1.88
3363--3401
3
12.7
3
94
5
69
66
0
0
33
0.92
7204--7233
2
15.0
2
100
0
60
50
0
0
50
1.00
12210--12263
28
1.9
28
92
7
92
40
1
14
42
1.57
16685--17118
168
2.6
164
83
5
559
40
15
14
29
1.87

Tables:   1

The End!