Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000129.1 Corchorus capsularis cultivar CVL-1 contig00129, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6170

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1438--1590
53
2.9
52
85
9
220
37
28
13
20
1.91
1545--1646
30
3.4
28
75
20
91
40
28
11
19
1.87
1710--1814
31
3.5
30
86
5
140
34
20
12
33
1.90
1710--1795
29
2.9
30
91
3
129
37
19
10
32
1.86
2033--2100
32
2.3
27
73
21
73
33
11
7
47
1.68
2040--2103
32
2.0
32
93
0
110
29
14
7
48
1.71
2779--2933
78
2.0
78
90
0
247
31
11
14
41
1.82
4003--4049
24
2.0
24
91
0
76
25
25
8
40
1.84
5465--5569
31
3.5
30
84
5
122
32
12
20
34
1.90

Tables:   1

The End!