Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012900.1 Corchorus capsularis cultivar CVL-1 contig12921, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5681

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
156--272
36
3.2
36
80
2
128
26
21
24
27
1.99
510--596
45
2.0
44
83
2
111
29
18
26
25
1.98
770--818
17
2.9
17
90
0
80
28
22
28
20
1.98
788--1116
45
7.2
44
74
11
254
27
15
25
31
1.96
877--946
20
3.3
20
70
14
59
28
18
25
27
1.98
1238--1291
26
2.1
26
96
0
99
31
25
14
27
1.95
1739--1880
76
1.9
77
92
1
241
25
18
20
35
1.95
1720--1910
40
4.8
40
83
7
237
23
17
19
39
1.92
1888--2152
109
2.4
109
86
4
333
32
21
22
23
1.98
1917--2152
109
2.2
110
89
3
361
33
22
22
21
1.97
2110--2240
68
1.9
68
84
3
174
32
19
22
25
1.98
2558--2593
18
2.0
18
88
0
54
22
33
19
25
1.97

Tables:   1

The End!