Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012902.1 Corchorus capsularis cultivar CVL-1 contig12923, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23089

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1979--2029
25
2.1
24
82
10
59
33
9
9
47
1.70
3433--3508
36
2.1
37
82
7
93
39
6
23
30
1.80
3505--3623
48
2.5
48
91
0
184
36
8
25
30
1.85
6966--7026
27
2.2
27
97
2
113
54
6
32
6
1.52
7030--7060
2
15.5
2
100
0
62
51
0
0
48
1.00
7140--7266
64
2.0
62
84
7
166
21
24
9
44
1.81
7436--7546
54
2.1
54
94
0
195
41
9
8
41
1.66
8351--8382
9
3.4
10
91
8
50
0
34
0
65
0.93

Tables:   1

The End!