Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012903.1 Corchorus capsularis cultivar CVL-1 contig12924, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23072

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--56
2
28.0
2
100
0
112
0
50
0
50
1.00
2625--2791
88
1.9
88
91
0
271
25
14
17
43
1.86
7232--7447
99
2.2
99
80
5
249
33
23
20
22
1.97
12732--12759
2
14.0
2
100
0
56
50
0
0
50
1.00
20515--20543
12
2.4
12
100
0
58
10
20
37
31
1.86

Tables:   1

The End!