Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012906.1 Corchorus capsularis cultivar CVL-1 contig12927, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13597

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1037--1081
3
15.3
3
95
4
83
33
35
0
31
1.58
2153--2273
60
2.0
61
96
3
226
27
4
31
36
1.78
5835--5870
1
36.0
1
94
0
63
2
0
0
97
0.18
7782--7834
27
2.0
27
92
0
88
26
20
33
18
1.96
10226--10309
28
3.0
29
78
5
82
44
26
11
17
1.84
10277--10374
46
2.1
46
86
1
133
44
27
12
15
1.82
13403--13455
27
2.0
27
100
0
106
22
20
37
18
1.94

Tables:   1

The End!