Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012909.1 Corchorus capsularis cultivar CVL-1 contig12930, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25689

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1657--1690
14
2.4
14
90
0
50
82
2
5
8
0.93
5567--5663
36
2.8
36
87
7
137
46
4
12
37
1.61
5567--5672
35
3.0
33
82
10
99
47
5
11
35
1.63
14224--14346
11
11.1
11
80
6
133
62
7
19
10
1.50
14374--14931
36
15.7
36
89
1
768
44
9
21
24
1.82
14387--14931
143
3.8
143
90
2
828
44
9
21
24
1.82
14406--14931
178
3.0
179
92
1
855
45
9
21
23
1.81
14916--15038
37
3.4
35
73
23
119
46
7
21
25
1.77
14935--15052
32
3.4
32
76
18
103
46
5
21
26
1.74
14968--15068
32
2.9
36
76
15
115
46
6
19
26
1.75
17097--17137
21
2.0
21
85
0
55
21
31
26
19
1.97
23301--23327
6
4.5
6
100
0
54
55
14
0
29
1.40
23324--23368
13
3.5
13
90
3
74
55
8
13
22
1.65
23324--23376
25
2.1
25
89
6
81
58
9
11
20
1.60

Tables:   1

The End!