Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012914.1 Corchorus capsularis cultivar CVL-1 contig12935, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6038

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1294--1349
17
3.2
17
80
5
67
26
19
0
53
1.45
1482--1789
21
14.2
21
71
14
191
21
22
5
50
1.69
1546--1693
36
3.9
36
86
10
190
20
20
6
51
1.70
1609--1754
22
6.8
22
75
17
119
21
21
5
51
1.68
1738--1884
35
4.2
34
81
9
129
19
25
2
52
1.59
1867--1901
14
2.5
14
85
0
52
25
22
0
51
1.48
1895--1934
21
1.9
21
84
0
53
17
22
2
57
1.52
1977--2011
16
2.1
17
89
5
54
14
22
5
57
1.59
2105--2202
38
2.5
39
75
8
92
24
22
6
46
1.74
2707--2765
24
2.3
26
80
11
70
47
22
18
11
1.81

Tables:   1

The End!