Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012915.1 Corchorus capsularis cultivar CVL-1 contig12936, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4282

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--33
15
2.2
15
89
10
50
24
18
6
51
1.68
1--127
36
3.3
36
86
9
155
21
20
6
51
1.69
43--188
22
6.8
22
73
17
110
21
20
5
52
1.67
172--279
35
3.1
34
85
6
128
19
25
3
51
1.63
198--289
35
2.6
35
91
3
141
17
27
3
52
1.60
299--337
14
2.8
14
84
0
51
25
25
0
48
1.51
331--370
21
1.9
21
84
0
53
17
22
2
57
1.52
413--447
16
2.1
17
89
5
54
14
22
5
57
1.59
438--544
40
2.6
39
84
10
126
24
20
4
50
1.67
728--802
38
1.9
40
81
5
91
25
24
4
46
1.69

Tables:   1

The End!