Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001292.1 Corchorus capsularis cultivar CVL-1 contig01292, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9101

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1830--1857
2
14.0
2
100
0
56
50
0
0
50
1.00
3822--3851
6
5.0
6
95
0
51
20
13
50
16
1.78
4247--4298
16
3.3
16
86
2
79
50
28
13
7
1.69
4494--4581
16
5.5
16
71
10
72
39
36
7
15
1.77
4484--4581
32
3.1
32
92
0
160
37
37
9
15
1.79
4933--4979
23
2.0
23
84
8
60
44
4
4
46
1.42
4992--5038
23
2.0
23
84
8
60
65
8
2
23
1.31
5020--5078
26
2.4
26
80
8
70
45
15
5
33
1.68
6637--6723
30
2.9
30
86
8
108
37
2
11
48
1.52
8976--9007
16
2.0
16
93
0
55
34
6
12
46
1.67

Tables:   1

The End!