Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001293.1 Corchorus capsularis cultivar CVL-1 contig01293, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1707

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
241--320
22
3.6
22
73
9
74
35
12
16
36
1.86
292--370
22
3.6
22
89
0
122
35
16
15
32
1.90
488--593
22
4.8
22
74
11
65
35
6
16
40
1.75
544--598
22
2.5
22
85
8
78
41
3
14
40
1.63
638--768
22
5.9
22
72
12
88
40
9
13
35
1.78
688--782
44
2.2
44
80
3
102
40
10
15
33
1.82
1037--1097
31
2.0
31
87
6
90
31
16
4
47
1.68
1126--1166
21
2.0
21
85
4
57
29
4
0
65
1.13
1216--1322
22
4.9
22
90
2
162
33
13
16
36
1.88
1216--1376
22
7.2
22
83
4
108
32
10
18
38
1.85
1557--1675
21
5.5
21
71
16
73
43
9
13
33
1.76
1609--1674
25
2.8
24
80
15
75
45
7
9
37
1.64
1574--1674
22
4.5
22
75
14
75
44
8
11
34
1.73

Tables:   1

The End!