Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012930.1 Corchorus capsularis cultivar CVL-1 contig12951, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20179

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4351--4375
10
2.5
10
100
0
50
28
8
24
40
1.83
7400--7467
21
3.1
23
76
19
74
17
47
22
13
1.82
9659--9684
10
2.6
10
100
0
52
50
19
7
23
1.73
10625--10651
6
4.5
6
100
0
54
29
0
14
55
1.40
11179--11214
15
2.5
15
90
4
56
38
8
13
38
1.75
11179--11228
14
3.5
14
86
8
57
40
8
14
38
1.75
11810--11884
27
2.7
27
83
4
96
17
13
25
44
1.85
12246--12287
20
2.2
20
87
8
61
73
14
4
7
1.21

Tables:   1

The End!