Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012945.1 Corchorus capsularis cultivar CVL-1 contig12966, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13118

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1481--1699
84
2.6
81
80
13
225
36
10
19
32
1.87
1535--1703
84
2.0
84
90
4
270
34
11
18
34
1.87
5556--5808
95
2.7
95
95
1
445
20
13
10
54
1.68
5557--5813
48
5.4
48
82
7
353
21
13
10
54
1.69
8683--8731
21
2.3
21
85
0
62
10
32
28
28
1.90
10098--10435
169
2.0
169
99
0
667
36
20
13
29
1.91

Tables:   1

The End!