Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012964.1 Corchorus capsularis cultivar CVL-1 contig12985, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15497

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
197--238
22
2.0
21
86
9
59
38
2
9
50
1.48
202--255
26
2.1
26
89
0
81
38
3
11
46
1.57
545--578
6
5.5
6
93
6
59
52
14
0
32
1.42
545--575
13
2.5
13
94
5
55
48
16
0
35
1.46
575--619
13
3.5
13
90
3
74
55
8
13
22
1.65
575--627
25
2.1
25
89
6
81
58
9
11
20
1.60
1926--1962
19
2.0
18
89
5
56
40
8
21
29
1.82
3267--3310
22
2.0
21
83
12
54
22
4
11
61
1.48
4590--4654
16
3.9
17
73
16
55
47
0
1
50
1.10
5410--5493
41
2.0
42
88
6
127
28
11
10
48
1.73
6285--6319
18
1.9
18
88
0
52
31
20
8
40
1.82
8111--8152
20
2.2
19
86
4
57
21
0
35
42
1.53
8343--8410
29
2.3
29
87
5
93
30
16
19
33
1.93
11143--11188
13
3.4
14
79
11
51
41
4
17
36
1.69
11842--11871
15
2.0
15
93
0
51
76
0
23
0
0.78

Tables:   1

The End!