Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012965.1 Corchorus capsularis cultivar CVL-1 contig12986, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11237

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--98
22
4.4
22
81
7
110
53
6
20
20
1.67
72--105
15
2.3
15
89
0
50
50
2
23
23
1.63
78--112
15
2.3
15
95
0
61
48
2
20
28
1.63
219--265
13
3.5
13
75
16
51
63
0
23
12
1.28
217--280
27
2.2
29
78
13
78
64
0
20
15
1.30
5174--5256
13
6.1
13
67
32
50
33
6
19
40
1.76
5174--5353
44
3.8
45
83
11
236
36
6
18
37
1.78
5253--5353
53
1.9
53
91
2
168
41
6
17
33
1.77
5716--5760
18
2.4
18
88
3
63
57
2
26
13
1.48
6057--6115
11
5.1
11
82
10
64
81
0
16
1
0.78
6058--6120
6
10.3
6
83
13
76
79
0
19
1
0.82
6058--6131
18
4.1
17
84
11
85
77
0
20
2
0.90
6058--6131
12
6.1
11
80
15
67
77
0
20
2
0.90
6402--6483
41
2.0
41
85
4
112
34
15
15
34
1.90
7026--7541
68
7.6
69
87
3
672
26
29
18
26
1.98
10926--11048
30
3.9
30
76
17
117
52
5
13
28
1.64
10919--11162
64
3.8
63
84
9
307
52
5
15
27
1.64

Tables:   1

The End!