Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012970.1 Corchorus capsularis cultivar CVL-1 contig12991, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30130

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
151--234
32
2.6
32
82
0
114
52
29
11
5
1.62
141--234
16
5.9
16
75
5
73
51
29
11
7
1.66
6304--6333
1
30.0
1
100
0
60
0
0
0
100
0.00
15079--15105
14
1.9
14
100
0
54
66
7
11
14
1.43
22474--22507
17
2.0
17
88
0
50
14
0
2
82
0.79
28321--28420
33
3.2
30
83
13
121
11
26
40
23
1.87

Tables:   1

The End!