Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012974.1 Corchorus capsularis cultivar CVL-1 contig12995, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11275

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
83--188
22
5.0
22
79
7
121
54
5
17
21
1.63
83--235
44
3.7
42
77
19
162
52
5
19
22
1.65
168--202
14
2.4
15
85
9
54
51
5
17
25
1.67
154--224
36
2.0
36
94
5
126
50
5
19
23
1.69
186--232
22
2.1
22
96
0
85
55
4
19
21
1.60
301--364
27
2.2
29
78
13
78
60
0
23
15
1.34

Tables:   1

The End!