Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012984.1 Corchorus capsularis cultivar CVL-1 contig13005, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20631

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5669--5911
122
2.0
120
94
1
423
31
16
18
34
1.92
9316--9425
46
2.4
46
100
0
220
44
12
20
22
1.85
18249--18369
33
3.7
33
83
2
136
29
9
19
41
1.83
18395--18474
33
2.4
33
91
0
124
35
8
13
42
1.76
18407--18495
33
3.0
28
83
9
90
34
7
14
42
1.75
18445--18501
27
2.1
27
86
0
78
33
12
14
40
1.83

Tables:   1

The End!