Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012986.1 Corchorus capsularis cultivar CVL-1 contig13007, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29523

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
182--260
32
2.5
32
93
0
140
21
30
35
12
1.91
2667--2700
15
2.4
14
95
5
59
23
11
8
55
1.63
5713--6293
290
2.0
290
100
0
1162
34
22
9
33
1.87
7010--7048
20
2.0
20
90
5
62
43
7
7
41
1.62
11636--11703
35
2.0
34
88
2
100
50
7
10
32
1.64
13190--13269
40
2.0
40
95
0
142
35
21
18
25
1.96
14018--14080
30
2.1
30
93
0
108
7
22
46
23
1.78
17907--17969
30
2.1
30
90
0
99
11
23
44
20
1.83
28675--28700
10
2.6
10
100
0
52
50
19
7
23
1.73

Tables:   1

The End!