Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012987.1 Corchorus capsularis cultivar CVL-1 contig13008, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5661

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2494--2522
12
2.3
13
94
5
51
17
6
20
55
1.65
4037--4066
11
2.7
11
94
0
51
40
0
20
40
1.52
4037--4096
22
2.9
22
76
19
65
43
3
18
35
1.67
4049--4087
18
2.1
19
90
4
62
46
2
20
30
1.64
4474--4499
10
2.6
10
100
0
52
50
19
7
23
1.73

Tables:   1

The End!