Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012993.1 Corchorus capsularis cultivar CVL-1 contig13014, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  72083

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4037--4180
58
2.5
56
81
10
139
32
40
17
9
1.81
4957--5012
16
3.6
15
83
7
67
42
35
12
8
1.74
21673--21708
18
1.9
18
88
5
54
38
22
0
38
1.54
27098--27129
6
5.5
6
96
3
57
56
15
0
28
1.40
30836--30860
9
2.8
9
100
0
50
12
0
0
88
0.53
31898--31962
30
2.2
30
91
0
103
6
29
38
26
1.80
34693--34742
23
2.1
23
85
10
66
58
12
6
24
1.56
35938--35971
8
4.1
8
92
7
59
61
14
0
23
1.33
35938--35971
17
2.1
16
94
5
59
61
14
0
23
1.33
37659--37772
33
3.6
31
83
5
131
32
10
16
40
1.83
62325--62374
21
2.4
21
89
0
73
30
32
30
8
1.86

Tables:   1

The End!