Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012995.1 Corchorus capsularis cultivar CVL-1 contig13016, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14233

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3782--4020
78
3.2
78
89
5
352
36
12
0
50
1.45
3782--4014
70
3.2
70
83
10
306
36
13
0
49
1.45
4700--4737
7
5.3
7
93
6
67
84
0
15
0
0.63
4700--4737
15
2.6
14
92
8
67
84
0
15
0
0.63
4693--4748
15
3.8
14
83
9
58
75
0
25
0
0.81
4694--4748
22
2.5
22
84
3
83
74
0
25
0
0.82
7030--9890
551
5.2
548
86
2
3749
37
14
14
32
1.87

Tables:   1

The End!