Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012996.1 Corchorus capsularis cultivar CVL-1 contig13017, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12964

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1047--1085
2
19.5
2
100
0
78
51
0
0
48
1.00
2335--2380
14
2.9
16
81
18
60
30
4
8
56
1.49
8242--8336
37
2.6
37
84
3
120
55
13
16
13
1.69
8264--8346
37
2.5
31
74
20
85
59
13
13
14
1.63
8391--8461
27
2.5
28
84
4
90
53
1
11
33
1.45
8488--8551
30
2.2
30
91
2
103
50
4
18
26
1.67
12793--12837
2
22.5
2
100
0
90
51
0
0
48
1.00

Tables:   1

The End!