Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000013.1 Corchorus capsularis cultivar CVL-1 contig00013, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2121

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1050--1174
65
1.9
66
96
1
234
22
20
15
42
1.89
1147--1226
35
2.3
35
100
0
160
26
20
16
37
1.93
1015--1330
148
2.1
149
94
0
544
23
18
14
42
1.88
1198--1323
66
1.9
67
88
3
193
22
16
14
46
1.83
1212--1450
65
3.7
64
82
3
239
24
19
14
41
1.89
1743--1826
27
3.1
27
85
0
123
17
19
23
39
1.92
1750--1845
27
3.6
27
85
2
122
16
16
26
40
1.90
1743--1845
54
1.9
54
84
4
136
17
18
24
39
1.91
1899--1941
18
2.3
18
88
4
59
86
2
11
0
0.67

Tables:   1

The End!