Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013005.1 Corchorus capsularis cultivar CVL-1 contig13026, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24306

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
89--134
22
2.0
23
87
4
67
56
17
13
13
1.67
1910--1936
2
13.5
2
100
0
54
48
0
0
51
1.00
2042--2075
11
3.2
11
91
4
52
38
5
2
52
1.41
2286--2334
21
2.3
21
85
0
62
28
10
20
40
1.85
8960--8984
1
25.0
1
100
0
50
0
100
0
0
0.00
10584--10629
5
9.0
5
86
13
67
56
2
0
41
1.11
11695--11728
3
11.7
3
93
6
61
35
0
0
64
0.94
17583--17623
17
2.4
17
91
0
64
60
9
2
26
1.40
18292--18317
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!