Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013007.1 Corchorus capsularis cultivar CVL-1 contig13028, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51065

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1841--1904
21
3.0
21
86
6
85
40
17
9
32
1.81
5137--5447
165
1.9
165
98
0
604
29
21
13
36
1.91
29672--29736
26
2.9
21
73
20
67
46
20
1
32
1.60
38729--38771
21
2.0
21
90
0
68
65
0
23
11
1.25
39107--39224
21
5.6
21
89
0
182
55
18
6
19
1.65
48020--48049
6
5.2
6
96
4
53
53
13
0
33
1.40
50934--51040
31
3.5
31
70
14
114
34
21
18
25
1.96
50938--51065
60
2.1
60
91
0
202
34
21
17
25
1.96

Tables:   1

The End!