Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013010.1 Corchorus capsularis cultivar CVL-1 contig13031, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9041

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
541--571
11
2.7
11
95
5
53
70
0
0
29
0.87
5244--5400
85
1.8
85
90
2
253
50
0
12
36
1.41
5650--5909
22
11.8
22
67
15
74
39
11
14
35
1.82
5693--5799
45
2.4
44
79
13
112
34
14
17
33
1.90
5782--5885
44
2.4
44
75
6
102
35
12
13
38
1.83
5810--5910
44
2.3
44
81
6
116
38
11
11
37
1.79
6988--7128
71
2.0
69
87
5
203
46
16
14
21
1.83

Tables:   1

The End!