Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013011.1 Corchorus capsularis cultivar CVL-1 contig13032, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12981

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1129--1215
48
1.9
47
88
11
137
37
3
9
49
1.52
1128--1226
48
2.1
48
82
14
127
38
3
10
48
1.52
1303--1361
30
2.0
30
87
6
86
55
0
5
38
1.22
1339--1379
20
2.0
20
85
4
55
48
0
0
51
1.00
4833--4862
1
30.0
1
93
0
51
0
96
0
3
0.21
5100--5160
29
2.1
29
96
0
113
29
3
18
49
1.63
12909--12962
23
2.4
21
78
9
63
14
7
7
70
1.32

Tables:   1

The End!