Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013012.1 Corchorus capsularis cultivar CVL-1 contig13033, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27002

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2187--2244
28
2.1
28
96
0
107
27
15
24
32
1.95
2608--2640
12
2.8
12
86
13
50
33
0
9
57
1.30
5411--5448
13
2.7
14
80
12
51
68
7
7
15
1.37
5966--5993
2
14.0
2
100
0
56
50
0
0
50
1.00
6540--6596
26
2.2
25
87
9
80
43
17
5
33
1.71
8411--8530
39
3.1
39
96
0
222
25
20
10
43
1.83
14195--14230
18
2.1
17
94
5
63
63
8
16
11
1.49
16445--16491
21
2.2
22
88
11
71
44
23
10
21
1.83
17029--17064
18
2.1
17
94
5
63
63
8
16
11
1.49
22000--22069
21
3.3
21
67
15
63
24
32
28
14
1.94
21998--22088
42
2.2
42
95
0
164
25
32
26
15
1.95
22021--22088
21
3.2
21
68
15
59
23
32
26
17
1.97

Tables:   1

The End!