Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013020.1 Corchorus capsularis cultivar CVL-1 contig13041, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8842

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4207--4311
33
3.2
32
81
5
129
24
9
20
45
1.80
4341--4445
33
3.2
33
94
0
174
27
8
18
45
1.78
4788--4846
30
2.0
30
90
6
93
30
16
30
22
1.96
6905--6931
6
4.5
6
100
0
54
55
14
0
29
1.40
6928--6972
13
3.5
13
90
3
74
55
8
13
22
1.65
6928--6980
25
2.1
25
89
6
81
58
9
11
20
1.60

Tables:   1

The End!