Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013026.1 Corchorus capsularis cultivar CVL-1 contig13047, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9854

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
899--1055
33
4.7
33
85
6
194
21
42
27
8
1.81
2818--2938
38
3.2
37
88
2
143
32
19
19
29
1.96
2941--3024
38
2.3
38
83
8
111
32
21
17
28
1.96
2965--3060
35
2.6
36
86
4
122
31
21
18
28
1.97
3095--3265
54
3.4
51
71
19
171
27
28
15
28
1.96
3126--3311
42
4.2
42
74
15
158
24
26
19
29
1.99
3194--3229
18
2.0
18
94
0
63
25
27
8
38
1.84
3088--3307
96
2.3
95
91
3
352
25
27
19
27
1.99
3284--3338
27
2.0
27
100
0
110
21
25
20
32
1.97
3245--3374
68
1.9
69
88
1
199
22
23
20
33
1.97
3924--3981
27
2.1
27
96
0
107
22
22
12
43
1.86
6309--6337
2
14.5
2
100
0
58
0
0
48
51
1.00

Tables:   1

The End!