Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013030.1 Corchorus capsularis cultivar CVL-1 contig13051, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14100

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1591--1655
31
2.1
31
88
5
96
50
4
15
29
1.64
1982--2008
2
13.5
2
100
0
54
51
0
0
48
1.00
3014--3070
29
2.0
29
82
6
71
43
12
14
29
1.81
3502--3559
27
2.2
27
78
3
64
31
6
17
44
1.75
3515--3565
27
2.0
25
85
11
68
27
7
15
49
1.72
12547--12572
13
2.0
13
100
0
52
23
15
7
53
1.67
13610--13649
2
19.5
2
94
5
71
50
2
0
47
1.14
13732--14024
109
2.6
109
91
4
453
37
11
1
49
1.49

Tables:   1

The End!