Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013050.1 Corchorus capsularis cultivar CVL-1 contig13071, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3865

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
87--130
22
2.0
21
83
12
54
45
9
18
27
1.79
94--184
36
2.5
36
81
0
110
39
4
26
29
1.75
130--178
22
2.2
22
82
7
55
34
2
32
30
1.69
239--289
16
3.3
16
83
10
70
41
1
25
31
1.67
249--311
22
3.0
22
79
4
67
41
1
23
33
1.64
306--361
21
2.6
21
88
5
76
46
5
17
30
1.71
340--471
58
2.3
59
82
6
153
42
12
21
23
1.87
456--558
8
13.2
8
72
11
81
49
2
21
26
1.63
457--558
24
4.4
23
80
7
91
50
2
20
26
1.63
481--603
45
2.7
44
81
5
122
49
2
22
25
1.62
1581--1611
16
1.9
16
93
0
53
12
12
0
74
1.08
1573--1625
19
2.9
18
81
16
65
13
16
0
69
1.18
2315--2343
15
2.0
15
93
6
51
55
6
6
31
1.53

Tables:   1

The End!