Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013052.1 Corchorus capsularis cultivar CVL-1 contig13073, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3209

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14--98
27
3.1
27
65
13
66
36
16
31
15
1.90
1178--1500
38
8.6
38
77
14
248
48
7
18
25
1.73
1187--1331
70
2.1
70
96
0
263
50
6
16
26
1.70
1369--1507
40
3.5
42
84
10
175
47
7
20
24
1.75
1498--1532
16
2.1
17
89
5
54
60
2
20
17
1.49
1520--1920
43
9.4
43
75
13
339
53
6
20
18
1.68
1520--1920
22
18.9
22
72
12
284
53
6
20
18
1.68
1558--1840
102
2.7
101
84
10
340
53
7
20
18
1.69
1781--1905
65
1.9
64
85
1
169
53
7
20
19
1.68
1859--1949
22
4.1
21
76
8
56
57
2
18
21
1.51
1879--1949
29
2.4
29
84
9
83
57
1
19
21
1.48
1901--1949
15
3.4
14
82
5
53
59
0
18
22
1.38

Tables:   1

The End!