Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013055.1 Corchorus capsularis cultivar CVL-1 contig13076, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32657

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1679--1710
13
2.4
14
85
15
50
53
12
6
28
1.62
7741--7793
21
2.5
20
84
3
61
9
35
28
26
1.87
9518--9559
22
1.9
22
85
0
57
14
16
21
47
1.82
17211--17241
15
2.1
15
93
0
53
32
19
16
32
1.94
19053--19086
18
1.9
18
88
5
52
52
23
5
17
1.66
32167--32244
27
2.9
27
84
1
102
46
23
10
20
1.81
32476--32649
57
3.0
57
77
1
204
40
14
20
24
1.90
32476--32636
58
2.8
58
80
3
175
40
16
19
22
1.90

Tables:   1

The End!