Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013060.1 Corchorus capsularis cultivar CVL-1 contig13081, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33827

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15389--15415
6
4.5
6
100
0
54
29
0
14
55
1.40
22304--22330
6
4.5
6
100
0
54
29
0
14
55
1.40
28852--28998
41
3.6
41
90
0
206
37
12
22
27
1.91
28990--29313
37
8.4
36
81
11
324
45
9
19
25
1.80
29050--29147
49
2.0
49
94
4
171
40
10
20
28
1.85
29013--29184
86
2.0
86
89
2
265
43
9
19
27
1.82
29330--29505
41
4.5
40
81
11
220
43
13
21
22
1.87
29626--29747
37
3.4
37
86
4
160
40
9
25
25
1.85
29725--29792
32
2.1
32
97
0
127
35
8
26
29
1.87
29738--29920
36
5.2
35
77
11
171
43
8
20
27
1.81
29798--29948
71
2.1
72
96
2
277
50
8
15
25
1.71

Tables:   1

The End!