Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013061.1 Corchorus capsularis cultivar CVL-1 contig13082, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7688

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1071--2000
440
2.1
439
82
6
1137
27
13
16
42
1.86
2268--2336
30
2.3
29
82
7
86
43
20
17
18
1.88
5460--5505
19
2.3
20
85
14
69
39
23
0
36
1.55
6076--6145
29
2.3
30
80
11
81
21
18
18
41
1.91
6471--6622
62
2.5
62
93
0
250
35
13
8
42
1.74
6530--6762
22
10.8
22
65
15
85
34
14
10
40
1.80
6780--6841
21
2.9
21
76
11
63
40
14
9
35
1.79
6876--7111
22
11.1
22
70
15
151
35
16
8
39
1.79
7220--7268
22
2.3
22
82
3
64
40
14
8
36
1.75
7227--7340
22
5.2
22
73
6
88
30
15
11
42
1.83
7574--7646
31
2.4
30
81
9
76
49
8
15
27
1.72

Tables:   1

The End!