Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013067.1 Corchorus capsularis cultivar CVL-1 contig13088, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4576

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
758--866
32
3.5
31
86
3
137
30
36
22
10
1.87
758--867
16
6.9
16
72
6
89
30
36
23
10
1.88
1941--2066
16
7.5
16
74
16
94
31
36
23
8
1.85
1942--2066
7
15.9
8
69
22
61
32
36
23
8
1.84
1942--2068
32
3.8
33
77
12
116
32
36
23
7
1.84
2199--2257
31
1.9
31
86
6
84
33
16
3
45
1.64
2384--2479
38
2.6
37
81
3
120
15
19
10
54
1.70
2537--2659
22
5.6
22
72
13
92
43
9
14
31
1.78
2537--3195
44
14.8
43
68
14
134
38
9
16
35
1.81
2782--3239
22
20.7
22
73
14
279
37
9
15
37
1.80
3298--3449
62
2.5
62
90
0
232
42
9
13
34
1.78

Tables:   1

The End!