Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013072.1 Corchorus capsularis cultivar CVL-1 contig13093, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45353

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
131--167
11
3.3
11
92
7
65
27
16
0
56
1.40
2797--2842
17
2.7
17
96
0
83
30
15
32
21
1.94
17067--17143
28
2.8
28
97
0
145
10
22
7
59
1.55
19936--19963
2
14.0
2
100
0
56
50
0
0
50
1.00
22723--22763
20
2.0
20
85
0
55
53
0
12
34
1.38
38311--38353
19
2.3
19
84
11
54
67
2
18
11
1.32
42609--42690
27
2.9
27
79
16
85
47
1
2
48
1.22
42611--42690
30
2.8
28
80
12
83
47
1
2
48
1.23

Tables:   1

The End!