Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01013078.1 Corchorus capsularis cultivar CVL-1 contig13099, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14697

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--34
2
17.0
2
100
0
68
50
0
0
50
1.00
1356--1597
30
8.1
30
93
0
358
31
24
34
9
1.88
6250--6286
3
12.3
3
100
0
74
64
0
35
0
0.94
11635--11671
2
18.5
2
100
0
74
51
0
0
48
1.00
12552--12610
29
2.0
30
86
3
84
52
3
3
40
1.35
12707--12746
20
1.9
22
85
10
57
42
0
0
57
0.98
14385--14413
15
1.9
15
100
0
58
55
10
0
34
1.34
14648--14687
2
21.0
2
90
10
66
50
0
0
50
1.00

Tables:   1

The End!